SRX043880
GSM677640: Snyder N2 POLII L3 rep1 extraction1 seq1 aliquote 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_N2_POLII_L3_rep1 extraction1_seq1 channel_2
strain
N2(genotype : wild type genotype : DR subclone of DB original (Tc1 pattern I) official name : N2 )
developmental stage
L3
genotype
wild type
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM677640: Snyder_N2_POLII_L3_rep1 extraction1_seq1 aliquote 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
7075959
Reads aligned (%)
63.0
Duplicates removed (%)
32.9
Number of peaks
2790 (qval < 1E-05)

ce10

Number of total reads
7075959
Reads aligned (%)
63.0
Duplicates removed (%)
32.9
Number of peaks
2812 (qval < 1E-05)

Base call quality data from DBCLS SRA