Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Embryo
Cell type
Early embryo
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_N2_POLII_eemb_rep2 extraction2_seq1 channel_1
strain
N2(genotype : wild type genotype : DR subclone of DB original (Tc1 pattern I) official name : N2 )
developmental stage
early embryo
genotype
wild type
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM677625: Snyder_N2_POLII_eemb_rep2 extraction2_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

ce11

Number of total reads
3999191
Reads aligned (%)
80.0
Duplicates removed (%)
6.5
Number of peaks
208 (qval < 1E-05)

ce10

Number of total reads
3999191
Reads aligned (%)
80.0
Duplicates removed (%)
6.5
Number of peaks
206 (qval < 1E-05)

Base call quality data from DBCLS SRA