SRX042233
GSM674988: Input 266.6

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pancreas
Cell type
266-6
Tissue
Pancreas
Cell Type
Epithelial
Disease
Pancreatic Acinar Cell Tumor

Attributes by original data submitter

Sample

source_name
266.6 Pancreatic Cells
strain
C57BL/6 X SJL
cell type
pancreatic
passage
26
cell line
266.6
antibody
none

Sequenced DNA Library

library_name
GSM674988: Input_ 266.6
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
32575486
Reads aligned (%)
98.1
Duplicates removed (%)
9.2
Number of peaks
1076 (qval < 1E-05)

mm9

Number of total reads
32575486
Reads aligned (%)
97.9
Duplicates removed (%)
9.3
Number of peaks
1179 (qval < 1E-05)

Base call quality data from DBCLS SRA