SRX041881
GSM672403: Pro-B cell Rad21

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rad21

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Rad21 ChIP DNA from Pro-B cells
strain
C57BL/6J
cell type
Pro-B cell
genotype
Rag2-/-
antibody
Rad21
antibody vendor
Abcam

Sequenced DNA Library

library_name
GSM672403: Pro-B cell Rad21
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
34170366
Reads aligned (%)
73.8
Duplicates removed (%)
15.0
Number of peaks
26303 (qval < 1E-05)

mm9

Number of total reads
34170366
Reads aligned (%)
73.7
Duplicates removed (%)
15.2
Number of peaks
26283 (qval < 1E-05)

Base call quality data from DBCLS SRA