ChIP-Atlas: SRX041398

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Unclassified
Antigen: Unclassified

Cell type

Cell type Class: Unclassified
Cell type: Unclassified
NA: NA

Attributes by original data submitter

Sample

source_name: BRC
developmental stage: BRC
antibody name: core
manufacturer: Lepesant lab
catalog: N/A
fly type: iso1 (y; bw cn sp)

Sequenced DNA Library

library_name: GSM669694: BRC_core_ChIPSeq_1 and 2
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads: 47044525
Reads aligned (%): 95.2
Duplicates removed (%): 67.4
Number of peaks: 0 (qval < 1E-05)

dm3

Number of total reads: 47044525
Reads aligned (%): 95.5
Duplicates removed (%): 64.6
Number of peaks: 3425 (qval < 1E-05)

Base call quality data from DBCLS SRA