SRX041396
GSM669547: WPP K27me3 ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Pupae
Cell type
White prepupae
NA
NA

Attributes by original data submitter

Sample

source_name
WPP
developmental stage
WPP
antibody name
K27me3
manufacturer
Upstate-Millipore
catalog
07-449
fly type
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM669547: WPP_K27me3_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
39638722
Reads aligned (%)
96.8
Duplicates removed (%)
38.8
Number of peaks
32574 (qval < 1E-05)

dm3

Number of total reads
39638722
Reads aligned (%)
97.3
Duplicates removed (%)
35.5
Number of peaks
27836 (qval < 1E-05)

Base call quality data from DBCLS SRA