ChIP-Atlas: SRX041395

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Unclassified
Antigen: Unclassified

Cell type

Cell type Class: Embryo
Cell type: 0-12h embryos
NA: NA

Attributes by original data submitter

Sample

source_name: E0-12
developmental stage: E0-12
fly type: transgenic

Sequenced DNA Library

library_name: GSM669546: E0-12_Hr4_GFP_INPUT_1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads: 19660324
Reads aligned (%): 95.3
Duplicates removed (%): 13.4
Number of peaks: 7656 (qval < 1E-05)

dm3

Number of total reads: 19660324
Reads aligned (%): 95.9
Duplicates removed (%): 12.5
Number of peaks: 0 (qval < 1E-05)

Base call quality data from DBCLS SRA