Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
yki

Cell type

Cell type Class
Embryo
Cell type
0-4h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-4
developmental stage
E0-4
antibody name
Yki-91
manufacturer
Irvine Lab
catalog
N/A
fly type
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM669539: E0-4_Yki-91_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
45895499
Reads aligned (%)
14.6
Duplicates removed (%)
83.2
Number of peaks
11126 (qval < 1E-05)

dm6

Number of total reads
45895499
Reads aligned (%)
11.6
Duplicates removed (%)
86.6
Number of peaks
5837 (qval < 1E-05)

Base call quality data from DBCLS SRA