SRX041386
GSM669537: E16-24h anti-cbt ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
cbt

Cell type

Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-24h
developmental stage
E16-24h
antibody name
anti-cbt
manufacturer
Paricio Lab
catalog
N/A
fly type
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM669537: E16-24h_anti-cbt_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
43119791
Reads aligned (%)
98.1
Duplicates removed (%)
42.4
Number of peaks
4897 (qval < 1E-05)

dm3

Number of total reads
43119791
Reads aligned (%)
98.5
Duplicates removed (%)
40.3
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA