Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Fer3

Cell type

Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-24h
developmental stage
E16-24h
antibody name
KW4-Fer3-D1
manufacturer
White Lab
catalog
N/A
fly type
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM669477: E16-24h_KW4-Fer3-D1_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
49586813
Reads aligned (%)
69.3
Duplicates removed (%)
29.1
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
49586813
Reads aligned (%)
66.7
Duplicates removed (%)
31.5
Number of peaks
3004 (qval < 1E-05)

Base call quality data from DBCLS SRA