Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
h

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E8-16h
developmental stage
E8-16h
antibody name
KW3-h-D1
manufacturer
White Lab
catalog
N/A
fly type
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM669472: E8-16h_KW3-h-D1_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
43573145
Reads aligned (%)
69.7
Duplicates removed (%)
28.9
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
43573145
Reads aligned (%)
67.8
Duplicates removed (%)
30.6
Number of peaks
4516 (qval < 1E-05)

Base call quality data from DBCLS SRA