SRX041287
GSM671396: STAT1 IFNg ChIPSeq (human)

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
STAT1

Cell type

Cell type Class
Blood
Cell type
T cells
NA
NA

Attributes by original data submitter

Sample

source_name
T cell
cell type
T cell
antibody
STAT1
treatment
IFNg

Sequenced DNA Library

library_name
GSM671396: STAT1_IFNg_ChIPSeq (human)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
4655366
Reads aligned (%)
31.7
Duplicates removed (%)
66.0
Number of peaks
100 (qval < 1E-05)

hg38

Number of total reads
4655366
Reads aligned (%)
32.7
Duplicates removed (%)
65.2
Number of peaks
99 (qval < 1E-05)

Base call quality data from DBCLS SRA