Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat5a

Cell type

Cell type Class
Blood
Cell type
Th1 Cells
MeSH Description
A subset of helper-inducer T-lymphocytes which synthesize and secrete INTERLEUKIN-2; INTERFERON-GAMMA; and INTERLEUKIN-12. Due to their ability to kill antigen-presenting cells and their lymphokine-mediated effector activity, Th1 cells are associated with vigorous delayed-type hypersensitivity reactions.

Attributes by original data submitter

Sample

source_name
Th1 cell
strain
BALB/c
cell type
Th1 cell
antibody
STAT5A
treatment
2 rounds priming

Sequenced DNA Library

library_name
GSM671389: STAT5A_ChIPSeq (mouse)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
7962670
Reads aligned (%)
80.8
Duplicates removed (%)
75.4
Number of peaks
750 (qval < 1E-05)

mm9

Number of total reads
7962670
Reads aligned (%)
80.7
Duplicates removed (%)
75.7
Number of peaks
770 (qval < 1E-05)

Base call quality data from DBCLS SRA