SRX040617
GSM668388: lid

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
lid

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
wing imaginal discs, wild type, LID ChIP
genotype
wild type
developmental stage
third instar larvae
tissue
wing imaginal discs
chip antibody
lid
antibody vendor
custom-made
sequencing_date
June_2010

Sequenced DNA Library

library_name
GSM668388: lid
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
9732011
Reads aligned (%)
51.8
Duplicates removed (%)
75.5
Number of peaks
3770 (qval < 1E-05)

dm3

Number of total reads
9732011
Reads aligned (%)
53.1
Duplicates removed (%)
72.7
Number of peaks
4545 (qval < 1E-05)

Base call quality data from DBCLS SRA