Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
wing imaginal discs, LID RNAi knock-down, input
genotype
LID RNAi
developmental stage
third instar larvae
tissue
wing imaginal discs
chip antibody
none
sequencing_date
Oct_2010

Sequenced DNA Library

library_name
GSM668387: ctrl_trik4_r2_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm6

Number of total reads
31394442
Reads aligned (%)
94.3
Duplicates removed (%)
53.0
Number of peaks
35703 (qval < 1E-05)

dm3

Number of total reads
31394442
Reads aligned (%)
95.5
Duplicates removed (%)
50.9
Number of peaks
37870 (qval < 1E-05)

Base call quality data from DBCLS SRA