Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
wing imaginal discs, wild type, H3K4me3 ChIP
genotype
wild type
developmental stage
third instar larvae
tissue
wing imaginal discs
chip antibody
H3K4me3
antibody vendor
Abcam
antibody catalog number
ab8580
sequencing_date
Oct_2010

Sequenced DNA Library

library_name
GSM668384: trik4_wt_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm6

Number of total reads
32201005
Reads aligned (%)
97.4
Duplicates removed (%)
72.8
Number of peaks
8479 (qval < 1E-05)

dm3

Number of total reads
32201005
Reads aligned (%)
97.5
Duplicates removed (%)
72.4
Number of peaks
8861 (qval < 1E-05)

Base call quality data from DBCLS SRA