Antigen

Antigen Class

TFs and others

Antigen

Smarca4

Cell type

Cell type Class

Blood

Cell type

Th2 Cells

MeSH Description

A subset of helper-inducer T-lymphocytes which synthesize and secrete the INTERLEUKINS IL-4; IL-5; IL-6; and IL-10. These cytokines influence B-cell development and antibody production as well as augmenting humoral responses.

Sample

source_name

Chromatin IP against BRG1, stimulated Th2

strain

BALB/c

cell type

Th2 Stimulated CD4+ T helper cells

passages

differentiated in culture, single round, from Naïve cells

chip antibody

BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)

Sequenced DNA Library

library_name

GSM585297: Th2S

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

18382251

Reads aligned (%)

31.0

Duplicates removed (%)

14.0

Number of peaks

12891 (qval < 1E-05)

mm9

Number of total reads

18382251

Reads aligned (%)

31.0

Duplicates removed (%)

14.3

Number of peaks

12832 (qval < 1E-05)