Antigen

Antigen Class

TFs and others

Antigen

Smarca4

Cell type

Cell type Class

Blood

Cell type

Naive T cells

NA

NA

Sample

source_name

Chromatin IP against BRG1, uNaive

strain

BALB/c

cell type

Naive CD4+ T helper cells, straight from mouse

passages

CD4+CD62L+ Naive cells from 4-6 week mice, spleens and lymph nodes

chip antibody

BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)

Sequenced DNA Library

library_name

GSM585293: uNaive

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

11475234

Reads aligned (%)

42.5

Duplicates removed (%)

42.2

Number of peaks

3631 (qval < 1E-05)

mm9

Number of total reads

11475234

Reads aligned (%)

42.4

Duplicates removed (%)

42.6

Number of peaks

3595 (qval < 1E-05)