Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Fli1

Cell type

Cell type Class
Blood
Cell type
Th2 Cells
MeSH Description
A subset of helper-inducer T-lymphocytes which synthesize and secrete the INTERLEUKINS IL-4; IL-5; IL-6; and IL-10. These cytokines influence B-cell development and antibody production as well as augmenting humoral responses.

Attributes by original data submitter

Sample

source_name
T-helper 2 cells
strain
C57BL/6
cell type
T-helper 2 cells
chip antibody
Fli1 (santa cruz, cat#sc356X, Lot#L0407)

Sequenced DNA Library

library_name
GSM654874: Th2-Fli1 [Chip-seq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
3285771
Reads aligned (%)
8.7
Duplicates removed (%)
36.6
Number of peaks
2039 (qval < 1E-05)

mm9

Number of total reads
3285771
Reads aligned (%)
8.7
Duplicates removed (%)
36.6
Number of peaks
2035 (qval < 1E-05)

Base call quality data from DBCLS SRA