Antigen

Antigen Class

Histone

Antigen

H3K27me3

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Hematopoietic Stem & Progenitor Cells, H3K27me3 ChIP

chip antibody

H3K27me3

antibody vendor

Abcam

antibody catalog number

ab6002

antibody lot number

471907

cell type

CD133+ expanded umbilical cord blood (UCB) cells

cell number

1 million

biological replicate

1

Sequenced DNA Library

library_name

GSM638317: H3K27me3 ChIP-seq in HSPC

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

16812286

Reads aligned (%)

60.2

Duplicates removed (%)

56.6

Number of peaks

50 (qval < 1E-05)

hg19

Number of total reads

16812286

Reads aligned (%)

59.9

Duplicates removed (%)

57.4

Number of peaks

74 (qval < 1E-05)