Antigen

Antigen Class

TFs and others

Antigen

IKZF1

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Hematopoietic Stem & Progenitor Cells, Ikaros ChIP

chip antibody

IKZF1

antibody vendor

Santa Cruz

antibody catalog number

SC-9859X

antibody lot number

K2305

cell type

CD133+ expanded umbilical cord blood (UCB) cells

cell number

3 million

biological replicate

1

Sequenced DNA Library

library_name

GSM638312: Ikaros ChIP-seq in HSPC, run 1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

8897724

Reads aligned (%)

44.3

Duplicates removed (%)

21.6

Number of peaks

180 (qval < 1E-05)

hg19

Number of total reads

8897724

Reads aligned (%)

43.9

Duplicates removed (%)

22.5

Number of peaks

193 (qval < 1E-05)