Antigen

Antigen Class

TFs and others

Antigen

SPI1

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Hematopoietic Stem & Progenitor Cells, Pu.1 ChIP

chip antibody

Pu.1

antibody vendor

Santa Cruz

antibody catalog number

SC-352X

antibody lot number

F1808

cell type

CD133+ expanded umbilical cord blood (UCB) cells

cell number

3 million

biological replicate

1

Sequenced DNA Library

library_name

GSM638310: Pu.1 ChIP-seq in HSPC, run 1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

9587268

Reads aligned (%)

60.2

Duplicates removed (%)

35.1

Number of peaks

4606 (qval < 1E-05)

hg19

Number of total reads

9587268

Reads aligned (%)

59.8

Duplicates removed (%)

36.1

Number of peaks

4700 (qval < 1E-05)