Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TAL1

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

source_name
Hematopoietic Stem & Progenitor Cells, TAL1 ChIP
chip antibody
TAL1
antibody vendor
Santa Cruz
antibody catalog number
SC-12984
antibody lot number
D2408
cell type
CD133+ expanded umbilical cord blood (UCB) cells
cell number
3 million
biological replicate
2

Sequenced DNA Library

library_name
GSM638309: TAL1 ChIP-seq in HSPC, run 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
19850684
Reads aligned (%)
33.7
Duplicates removed (%)
24.2
Number of peaks
293 (qval < 1E-05)

hg38

Number of total reads
19850684
Reads aligned (%)
34.5
Duplicates removed (%)
23.1
Number of peaks
82 (qval < 1E-05)

Base call quality data from DBCLS SRA