Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Hematopoietic Stem & Progenitor Cells, input

chip antibody

None

cell type

CD133+ expanded umbilical cord blood (UCB) cells

biological replicate

1

Sequenced DNA Library

library_name

GSM638307: WCE_HSPC

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

17236978

Reads aligned (%)

42.0

Duplicates removed (%)

4.2

Number of peaks

53 (qval < 1E-05)

hg19

Number of total reads

17236978

Reads aligned (%)

41.5

Duplicates removed (%)

4.6

Number of peaks

188 (qval < 1E-05)