Curated Sample Data


Genome
hg19
Antigen Class
Histone
Antigen
H3K4me2
Cell type Class
Blood
Cell type
K-562

Cell type information


Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by Original Data Submitter


source_name
cultured K562 cells
chip antibody
H3K4me2
antibody manufacturer
Abcam
antibody catalog number
ab7766
cell line
K562

Metadata from Sequence Read Archive

Library Description


library_name
GSM646443: K562_H3K4me2_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Platform Information


instrument_model
Illumina Genome Analyzer II

External Database Query

Logs in read processing pipeline


Number of total reads
18105919
Reads aligned (%)
52.4
Duplicates removed (%)
6.2
Number of peaks
25288 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA