SRX038618
GSM646428: Huvec H4K20me1 rep1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H4K20me1

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
cultured HUVEC cells
chip antibody
H4K20me1
antibody manufacturer
Abcam
antibody catalog number
ab9051
cell line
HUVEC

Sequenced DNA Library

library_name
GSM646428: Huvec_H4K20me1_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29585258
Reads aligned (%)
56.7
Duplicates removed (%)
9.8
Number of peaks
1284 (qval < 1E-05)

hg19

Number of total reads
29585258
Reads aligned (%)
56.2
Duplicates removed (%)
10.8
Number of peaks
1358 (qval < 1E-05)

Base call quality data from DBCLS SRA