Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
cultured HUVEC cells
chip antibody
H3K27ac
antibody manufacturer
Abcam
antibody catalog number
ab4729
cell line
HUVEC

Sequenced DNA Library

library_name
GSM646414: Huvec_H3K27ac_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
22676505
Reads aligned (%)
74.7
Duplicates removed (%)
11.3
Number of peaks
39869 (qval < 1E-05)

hg19

Number of total reads
22676505
Reads aligned (%)
74.5
Duplicates removed (%)
11.5
Number of peaks
39789 (qval < 1E-05)

Base call quality data from DBCLS SRA