Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

source_name

cultured GM12878 cells

chip antibody

none

cell line

GM12878

Sequenced DNA Library

library_name

GSM646333: GM12878_WCE_rep2

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

9971871

Reads aligned (%)

72.7

Duplicates removed (%)

1.8

Number of peaks

373 (qval < 1E-05)

hg19

Number of total reads

9971871

Reads aligned (%)

71.8

Duplicates removed (%)

2.6

Number of peaks

535 (qval < 1E-05)