Antigen

Antigen Class

Histone

Antigen

H3K36me3

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

source_name

cultured GM12878 cells

chip antibody

H3K36me3

antibody manufacturer

Abcam

antibody catalog number

ab9050

cell line

GM12878

Sequenced DNA Library

library_name

GSM646321: GM12878_H3K36me3_rep2

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

14266462

Reads aligned (%)

75.1

Duplicates removed (%)

1.9

Number of peaks

145 (qval < 1E-05)

hg19

Number of total reads

14266462

Reads aligned (%)

74.6

Duplicates removed (%)

2.3

Number of peaks

158 (qval < 1E-05)