Antigen

Antigen Class

Histone

Antigen

H3K27me3

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

source_name

cultured GM12878 cells

chip antibody

H3K27me3

antibody manufacturer

Millipore

antibody catalog number

07-449

cell line

GM12878

Sequenced DNA Library

library_name

GSM646318: GM12878_H3K27me3_rep1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

28753039

Reads aligned (%)

50.1

Duplicates removed (%)

3.2

Number of peaks

1613 (qval < 1E-05)

hg19

Number of total reads

28753039

Reads aligned (%)

49.7

Duplicates removed (%)

3.7

Number of peaks

1664 (qval < 1E-05)