Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Arntl

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

source_name
Liver cells
strain
C57BL/6
tissue
Liver
time
ZT10
chip antibody
BMAL1

Sequenced DNA Library

library_name
GSM654885: BMAL1_ZT10_ChIP-Seq_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
30284878
Reads aligned (%)
95.9
Duplicates removed (%)
18.6
Number of peaks
865 (qval < 1E-05)

mm9

Number of total reads
30284878
Reads aligned (%)
95.7
Duplicates removed (%)
18.7
Number of peaks
933 (qval < 1E-05)

Base call quality data from DBCLS SRA