SRX037944
GSM651550: CD36 shBrg1 input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD36+
NA
NA

Attributes by original data submitter

Sample

source_name
CD36
condition
BRG1 RNAi KD
antibody
none

Sequenced DNA Library

library_name
GSM651550: CD36_shBrg1_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13581856
Reads aligned (%)
98.0
Duplicates removed (%)
2.2
Number of peaks
396 (qval < 1E-05)

hg19

Number of total reads
13581856
Reads aligned (%)
97.4
Duplicates removed (%)
3.1
Number of peaks
636 (qval < 1E-05)

Base call quality data from DBCLS SRA