SRX037936
GSM651542: CD36 shLuc CTCF

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Blood
Cell type
CD36+
NA
NA

Attributes by original data submitter

Sample

source_name
CD36
condition
BRG1 KD shLuc control
antibody
Anti-CTCF
vendor
Upstate

Sequenced DNA Library

library_name
GSM651542: CD36_shLuc_CTCF
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13089019
Reads aligned (%)
88.0
Duplicates removed (%)
16.0
Number of peaks
30681 (qval < 1E-05)

hg19

Number of total reads
13089019
Reads aligned (%)
87.4
Duplicates removed (%)
16.5
Number of peaks
30563 (qval < 1E-05)

Base call quality data from DBCLS SRA