Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NFYA

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
Chromatin IP with NFYA Ab
cell line
K562
antibody
NFYA (Santa Cruz H-209 sc-10779, Lot D2408)

Sequenced DNA Library

library_name
GSM648587: K562-NFYA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
13773273
Reads aligned (%)
77.8
Duplicates removed (%)
20.1
Number of peaks
15031 (qval < 1E-05)

hg38

Number of total reads
13773273
Reads aligned (%)
78.6
Duplicates removed (%)
19.6
Number of peaks
14945 (qval < 1E-05)

Base call quality data from DBCLS SRA