Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

Th1 Cells

MeSH Description

A subset of helper-inducer T-lymphocytes which synthesize and secrete INTERLEUKIN-2; INTERFERON-GAMMA; and INTERLEUKIN-12. Due to their ability to kill antigen-presenting cells and their lymphokine-mediated effector activity, Th1 cells are associated with vigorous delayed-type hypersensitivity reactions.

Sample

source_name

Th1

cell

Th1

cell organism

Human

cell description

primary human Th1 T cells

cell sex

U

Sequenced DNA Library

library_name

GSM646569: Stam_Th1

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

520674886

Reads aligned (%)

93.4

Duplicates removed (%)

44.7

Number of peaks

95853 (qval < 1E-05)

hg19

Number of total reads

520674886

Reads aligned (%)

92.8

Duplicates removed (%)

46.2

Number of peaks

94472 (qval < 1E-05)