Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rad21

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

source_name
Rad21 ChIP
strain
C57BL/6
tissue
bone marrow
genotype/variation
CD19+Rag1−/− pro-B
antibody
Rad21 (Millipore #ab992)

Sequenced DNA Library

library_name
GSM644976: Rad21_peaks
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
2911372
Reads aligned (%)
82.9
Duplicates removed (%)
32.7
Number of peaks
6657 (qval < 1E-05)

mm9

Number of total reads
2911372
Reads aligned (%)
82.7
Duplicates removed (%)
33.4
Number of peaks
6667 (qval < 1E-05)

Base call quality data from DBCLS SRA