Curated Sample Data


Genome
mm9
Antigen Class
Input control
Antigen
Input control
Cell type Class
Blood
Cell type
Hematopoietic Stem Cells

Cell type information


MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by Original Data Submitter


source_name
Bone marrow hematopoietic progenitor cells enriched by depletion of Lin+ cells
cell type
Lin- bone marrow hematopoietic progenitor cells
antibody
IgG

Metadata from Sequence Read Archive

Library Description


library_name
GSM641912: Lin- Control IgG ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Platform Information


instrument_model
Illumina Genome Analyzer

External Database Query

Logs in read processing pipeline


Number of total reads
8246213
Reads aligned (%)
47.6
Duplicates removed (%)
22.8
Number of peaks
66 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA