SRX035992
GSM641911: Lin- Gata2 ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata2

Cell type

Cell type Class
Blood
Cell type
Hematopoietic progenitors
NA
NA

Attributes by original data submitter

Sample

source_name
Bone marrow hematopoietic progenitor cells enriched by depletion of Lin+ cells
cell type
Lin- bone marrow hematopoietic progenitor cells
antibody
anti-Gata2

Sequenced DNA Library

library_name
GSM641911: Lin- Gata2 ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
14813227
Reads aligned (%)
61.8
Duplicates removed (%)
16.3
Number of peaks
2193 (qval < 1E-05)

mm9

Number of total reads
14813227
Reads aligned (%)
61.7
Duplicates removed (%)
16.5
Number of peaks
2211 (qval < 1E-05)

Base call quality data from DBCLS SRA