Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
JURL-MK1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
Input, human CML cell line
cell line
JURL_MK1
chip antibody
none (control)

Sequenced DNA Library

library_name
GSM640428: INPUT_Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
33151456
Reads aligned (%)
88.8
Duplicates removed (%)
8.8
Number of peaks
6806 (qval < 1E-05)

hg19

Number of total reads
33151456
Reads aligned (%)
87.6
Duplicates removed (%)
11.1
Number of peaks
6890 (qval < 1E-05)

Base call quality data from DBCLS SRA