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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: BCL6
wikigenes
PDBj
CellType: JURL-MK1
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX035160
GSM640427: BCL6 ChIPSeq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
BCL6
Cell type
Cell type Class
Blood
Cell type
JURL-MK1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous
Attributes by original data submitter
Sample
source_name
ChIPSeq, human CML cell line
cell line
JURL_MK1
chip antibody
anti-BCL6 antibody (N3)
chip antibody vendor
Santa Cruz
Sequenced DNA Library
library_name
GSM640427: BCL6_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
31275315
Reads aligned (%)
89.8
Duplicates removed (%)
25.0
Number of peaks
14128 (qval < 1E-05)
hg38
Number of total reads
31275315
Reads aligned (%)
90.1
Duplicates removed (%)
24.2
Number of peaks
14304 (qval < 1E-05)
Base call quality data from
DBCLS SRA