Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BCL6

Cell type

Cell type Class
Blood
Cell type
JURL-MK1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
ChIPSeq, human CML cell line
cell line
JURL_MK1
chip antibody
anti-BCL6 antibody (N3)
chip antibody vendor
Santa Cruz

Sequenced DNA Library

library_name
GSM640427: BCL6_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
31275315
Reads aligned (%)
67.3
Duplicates removed (%)
25.0
Number of peaks
14128 (qval < 1E-05)

hg38

Number of total reads
31275315
Reads aligned (%)
68.3
Duplicates removed (%)
24.2
Number of peaks
14304 (qval < 1E-05)

Base call quality data from DBCLS SRA