Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Embryo
Cell type
0-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-12h
developmental stage
E0-12h
fly
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM636839: E0-12h_Su[var]3-9_INPUT_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
19001046
Reads aligned (%)
96.8
Duplicates removed (%)
15.9
Number of peaks
1512 (qval < 1E-05)

dm3

Number of total reads
19001046
Reads aligned (%)
97.2
Duplicates removed (%)
14.7
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA