SRX033313
GSM636830: 5T-8-16h GFP ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
5T-8-16h
developmental stage
5T-8-16h
fly
transgenic
antibody name
GFP
manufacturer
White Lab
catalog
N/A

Sequenced DNA Library

library_name
GSM636830: 5T-8-16h_GFP_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
55132060
Reads aligned (%)
95.6
Duplicates removed (%)
27.1
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
55132060
Reads aligned (%)
95.8
Duplicates removed (%)
26.1
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA