SRX032596
GSM630810: YY1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
YY1

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells, YY1 ChIP
cell type
CD4+ T cells
antibody
rabbit anti-YY1 polyclonal
antibody vendor
Abcam

Sequenced DNA Library

library_name
GSM630810: YY1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
7286881
Reads aligned (%)
61.8
Duplicates removed (%)
17.3
Number of peaks
5129 (qval < 1E-05)

hg19

Number of total reads
7286881
Reads aligned (%)
61.3
Duplicates removed (%)
17.9
Number of peaks
5116 (qval < 1E-05)

Base call quality data from DBCLS SRA