Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A.X

Cell type

Cell type Class
Blood
Cell type
Jurkat
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
blood cells
cell type
Jurkat cells
chip antibody
γ-H2AX
chip antibody vendor
millipore

Sequenced DNA Library

library_name
GSM628535: Jurkat γ-H2AX
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
46027650
Reads aligned (%)
89.0
Duplicates removed (%)
12.6
Number of peaks
1409 (qval < 1E-05)

hg19

Number of total reads
46027650
Reads aligned (%)
88.0
Duplicates removed (%)
14.1
Number of peaks
1402 (qval < 1E-05)

Base call quality data from DBCLS SRA