SRX032127
GSM628270: EcR WPP-4-5h GFP INPUT 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EcR

Cell type

Cell type Class
Pupae
Cell type
White prepupae
NA
NA

Attributes by original data submitter

Sample

source_name
EcR_WPP-4-5h
fly
transgenic
developmental stage
: EcR_WPP-4-5h

Sequenced DNA Library

library_name
GSM628270: EcR_WPP-4-5h_GFP_INPUT_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
15825369
Reads aligned (%)
87.8
Duplicates removed (%)
7.0
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
15825369
Reads aligned (%)
88.1
Duplicates removed (%)
6.2
Number of peaks
639 (qval < 1E-05)

Base call quality data from DBCLS SRA