SRX032113
GSM628251: HP1-Covance ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Su(var)205

Cell type

Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-24h
developmental stage
E16-24h
antibody name
HP1-Covance
manufacturer
Covance
catalog
14923202

Sequenced DNA Library

library_name
GSM628251: HP1-Covance_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
37344521
Reads aligned (%)
96.8
Duplicates removed (%)
38.3
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
37344521
Reads aligned (%)
98.1
Duplicates removed (%)
32.8
Number of peaks
3371 (qval < 1E-05)

Base call quality data from DBCLS SRA