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For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Hr39
wikigenes
PDBj
CellType: 16-24h embryos
ATCC
MeSH
RIKEN BRC
SRX032109
GSM628224: KW4-Hr39-D1 ChIPSeq 1 and 2
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Hr39
Cell type
Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA
Attributes by original data submitter
Sample
source_name
E16-24h
fly
iso1 (y; bw cn sp)
developmental stage
E16-24h
antibody name
KW4-Hr39-D1
manufacturer
White Lab
catalog
N/A
Sequenced DNA Library
library_name
GSM628224: KW4-Hr39-D1_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
34592106
Reads aligned (%)
23.7
Duplicates removed (%)
75.1
Number of peaks
9241 (qval < 1E-05)
dm6
Number of total reads
34592106
Reads aligned (%)
17.2
Duplicates removed (%)
81.6
Number of peaks
4205 (qval < 1E-05)
Base call quality data from
DBCLS SRA