Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

MOLECULE
genomic DNA
DISEASE
None
BIOMATERIAL_PROVIDER
FHCRC HEIMFELD
BIOMATERIAL_TYPE
Primary Cell
CELL_TYPE
CD34 Primary Cells
MARKERS
CD34+
DONOR_ID
RO 01536
DONOR_AGE
27 years
DONOR_HEALTH_STATUS
NA
DONOR_SEX
female
DONOR_ETHNICITY
Hispanic
PASSAGE_IF_EXPANDED
NA
sample_term_id
CL_0000837

Sequenced DNA Library

library_name
Lib:RI:20100517:03--ChIP:Thanh:20100504:03:Mobilized CD34:H3K4Me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
21950496
Reads aligned (%)
89.4
Duplicates removed (%)
14.9
Number of peaks
19140 (qval < 1E-05)

hg19

Number of total reads
21950496
Reads aligned (%)
88.8
Duplicates removed (%)
16.2
Number of peaks
19343 (qval < 1E-05)

Base call quality data from DBCLS SRA