SRX031226
GSM623515: HUVEC DNASE

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
umbilical vein endothelial cells
cell line
HUVEC

Sequenced DNA Library

library_name
GSM623515: HUVEC_DNASE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40580317
Reads aligned (%)
96.2
Duplicates removed (%)
10.3
Number of peaks
24980 (qval < 1E-05)

hg19

Number of total reads
40580317
Reads aligned (%)
96.1
Duplicates removed (%)
10.9
Number of peaks
26815 (qval < 1E-05)

Base call quality data from DBCLS SRA