Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
GM18507
Tissue
blood
Lineage
mesoderm
Description
lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, treatment: Epstein-Barr Virus transformed

Attributes by original data submitter

Sample

source_name
NA18507
biomaterial_provider
NA18507
cell type
lymphoblastoid cell line
origin
Yoruba from Ibadan, Nigeria (YRI)

Sequenced DNA Library

library_name
GSM623490: NA18507: HapMap DNase Seq 7
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
14645201
Reads aligned (%)
24.4
Duplicates removed (%)
20.8
Number of peaks
10 (qval < 1E-05)

hg19

Number of total reads
14645201
Reads aligned (%)
23.7
Duplicates removed (%)
20.7
Number of peaks
19 (qval < 1E-05)

Base call quality data from DBCLS SRA